Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tubb4aQ9D6F9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb4aQ9D6F9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Gm45444-201ENSMUST00000211394 898 ntBASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb4aQ9D6F9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb4aQ9D6F9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb4aQ9D6F9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.87
Tubb4aQ9D6F9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tubb4aQ9D6F9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tubb4aQ9D6F9 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb4aQ9D6F9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tubb4aQ9D6F9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.5■□□□□ 0.87
Tubb4aQ9D6F9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tubb4aQ9D6F9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tubb4aQ9D6F9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tubb4aQ9D6F9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tubb4aQ9D6F9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tubb4aQ9D6F9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tubb4aQ9D6F9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tubb4aQ9D6F9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tubb4aQ9D6F9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms