Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Rarb-207ENSMUST00000225921 2756 ntBASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Chaf1bQ9D0N7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chaf1bQ9D0N7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chaf1bQ9D0N7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chaf1bQ9D0N7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 BC021767-201ENSMUST00000126387 1716 ntBASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chaf1bQ9D0N7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Chaf1bQ9D0N7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chaf1bQ9D0N7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chaf1bQ9D0N7 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms