Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc80Q9D0F1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc80Q9D0F1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Gm40848-201ENSMUST00000221998 324 ntBASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ndc80Q9D0F1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ndc80Q9D0F1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ndc80Q9D0F1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc80Q9D0F1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc80Q9D0F1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ndc80Q9D0F1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ndc80Q9D0F1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.23■□□□□ 0.67
Ndc80Q9D0F1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ndc80Q9D0F1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms