Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Etf1-202ENSMUST00000180351 108 ntBASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim13Q9CYB0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.55■□□□□ 0.4
Trim13Q9CYB0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim13Q9CYB0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim13Q9CYB0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim13Q9CYB0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim13Q9CYB0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim13Q9CYB0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.52■□□□□ 0.39
Trim13Q9CYB0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim13Q9CYB0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim13Q9CYB0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms