Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Gm26833-201ENSMUST00000180899 440 ntBASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Gm40848-201ENSMUST00000221998 324 ntBASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Khdc3Q9CWU5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc3Q9CWU5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc3Q9CWU5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Khdc3Q9CWU5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc3Q9CWU5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc3Q9CWU5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Khdc3Q9CWU5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms