Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc3Q9CW03 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc3Q9CW03 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc3Q9CW03 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc3Q9CW03 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc3Q9CW03 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc3Q9CW03 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Smc3Q9CW03 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc3Q9CW03 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc3Q9CW03 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc3Q9CW03 Gm43137-201ENSMUST00000198052 594 ntBASIC22.34■■□□□ 1.17
Smc3Q9CW03 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Smc3Q9CW03 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Smc3Q9CW03 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.34■■□□□ 1.17
Smc3Q9CW03 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc3Q9CW03 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
Smc3Q9CW03 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc3Q9CW03 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc3Q9CW03 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc3Q9CW03 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc3Q9CW03 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Smc3Q9CW03 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Smc3Q9CW03 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smc3Q9CW03 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Smc3Q9CW03 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.32■■□□□ 1.16
Smc3Q9CW03 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.32■■□□□ 1.16
Smc3Q9CW03 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.32■■□□□ 1.16
Smc3Q9CW03 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Smc3Q9CW03 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc3Q9CW03 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.31■■□□□ 1.16
Smc3Q9CW03 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Smc3Q9CW03 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.31■■□□□ 1.16
Smc3Q9CW03 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc3Q9CW03 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc3Q9CW03 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc3Q9CW03 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.3■■□□□ 1.16
Smc3Q9CW03 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Smc3Q9CW03 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.3■■□□□ 1.16
Smc3Q9CW03 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Smc3Q9CW03 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Smc3Q9CW03 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Smc3Q9CW03 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc3Q9CW03 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.3■■□□□ 1.16
Smc3Q9CW03 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.29■■□□□ 1.16
Smc3Q9CW03 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.29■■□□□ 1.16
Smc3Q9CW03 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smc3Q9CW03 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc3Q9CW03 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Smc3Q9CW03 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Smc3Q9CW03 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc3Q9CW03 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc3Q9CW03 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc3Q9CW03 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc3Q9CW03 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Smc3Q9CW03 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc3Q9CW03 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms