Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Gm9987-201ENSMUST00000069768 567 ntBASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Mir1199-201ENSMUST00000117015 119 ntBASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cldnd1Q9CQX5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.61■□□□□ 0.73
Cldnd1Q9CQX5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldnd1Q9CQX5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldnd1Q9CQX5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldnd1Q9CQX5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Cldnd1Q9CQX5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Cldnd1Q9CQX5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.57■□□□□ 0.72
Cldnd1Q9CQX5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldnd1Q9CQX5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms