Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9CQC3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9CQC3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9CQC3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Q9CQC3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.83■□□□□ 0.77
Q9CQC3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Q9CQC3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Q9CQC3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Q9CQC3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Q9CQC3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Q9CQC3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9CQC3 BC021767-201ENSMUST00000126387 1716 ntBASIC19.82■□□□□ 0.76
Q9CQC3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CQC3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Q9CQC3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Q9CQC3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CQC3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CQC3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Q9CQC3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CQC3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CQC3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Q9CQC3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CQC3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Q9CQC3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.8■□□□□ 0.76
Q9CQC3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Q9CQC3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.8■□□□□ 0.76
Q9CQC3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Q9CQC3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CQC3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CQC3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CQC3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CQC3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.79■□□□□ 0.76
Q9CQC3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.79■□□□□ 0.76
Q9CQC3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CQC3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Q9CQC3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CQC3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Q9CQC3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CQC3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CQC3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Q9CQC3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Q9CQC3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Q9CQC3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.78■□□□□ 0.76
Q9CQC3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.78■□□□□ 0.76
Q9CQC3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Q9CQC3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CQC3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.78■□□□□ 0.76
Q9CQC3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CQC3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Q9CQC3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CQC3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.76■□□□□ 0.75
Q9CQC3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CQC3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CQC3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CQC3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.76■□□□□ 0.75
Q9CQC3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CQC3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Q9CQC3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
Q9CQC3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CQC3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CQC3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CQC3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CQC3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Q9CQC3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CQC3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Q9CQC3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CQC3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms