Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34aQ99PP6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34aQ99PP6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Trim34aQ99PP6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Trim34aQ99PP6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34aQ99PP6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34aQ99PP6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34aQ99PP6 Gm10812-201ENSMUST00000099864 546 ntBASIC23.59■■□□□ 1.37
Trim34aQ99PP6 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.59■■□□□ 1.37
Trim34aQ99PP6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim34aQ99PP6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Trim34aQ99PP6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim34aQ99PP6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim34aQ99PP6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.58■■□□□ 1.37
Trim34aQ99PP6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.58■■□□□ 1.37
Trim34aQ99PP6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Trim34aQ99PP6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim34aQ99PP6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Trim34aQ99PP6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Trim34aQ99PP6 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.55■■□□□ 1.36
Trim34aQ99PP6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim34aQ99PP6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim34aQ99PP6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Trim34aQ99PP6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim34aQ99PP6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim34aQ99PP6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim34aQ99PP6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim34aQ99PP6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim34aQ99PP6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim34aQ99PP6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim34aQ99PP6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim34aQ99PP6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim34aQ99PP6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim34aQ99PP6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim34aQ99PP6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim34aQ99PP6 Gm12896-201ENSMUST00000118430 226 ntBASIC23.5■■□□□ 1.35
Trim34aQ99PP6 Gm27275-201ENSMUST00000184318 272 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms