Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh23Q99PF4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Cdh23Q99PF4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh23Q99PF4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh23Q99PF4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh23Q99PF4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh23Q99PF4 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.71■□□□□ 0.75
Cdh23Q99PF4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh23Q99PF4 Gm15378-201ENSMUST00000121894 207 ntBASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdh23Q99PF4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh23Q99PF4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Gm18666-201ENSMUST00000190039 958 ntBASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh23Q99PF4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh23Q99PF4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Cdh23Q99PF4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cdh23Q99PF4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cdh23Q99PF4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh23Q99PF4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh23Q99PF4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh23Q99PF4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.67■□□□□ 0.74
Cdh23Q99PF4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh23Q99PF4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Gm5417-201ENSMUST00000079706 384 ntBASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdh23Q99PF4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh23Q99PF4 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.64■□□□□ 0.74
Cdh23Q99PF4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh23Q99PF4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh23Q99PF4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.64■□□□□ 0.74
Cdh23Q99PF4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh23Q99PF4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh23Q99PF4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh23Q99PF4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh23Q99PF4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms