Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Gm7860-201ENSMUST00000121190 879 ntBASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Gtf2ird2Q99NI3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gtf2ird2Q99NI3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf2ird2Q99NI3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.52■□□□□ 0.72
Gtf2ird2Q99NI3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gtf2ird2Q99NI3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gtf2ird2Q99NI3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.52■□□□□ 0.71
Gtf2ird2Q99NI3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Gm37179-201ENSMUST00000194862 823 ntBASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf2ird2Q99NI3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf2ird2Q99NI3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Gtf2ird2Q99NI3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms