Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh4Q99MT2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Msh4Q99MT2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.49■□□□□ 0.55
Msh4Q99MT2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.49■□□□□ 0.55
Msh4Q99MT2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh4Q99MT2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.48■□□□□ 0.55
Msh4Q99MT2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh4Q99MT2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Msh4Q99MT2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Msh4Q99MT2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.47■□□□□ 0.55
Msh4Q99MT2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Gm5874-201ENSMUST00000096101 508 ntBASIC18.47■□□□□ 0.55
Msh4Q99MT2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh4Q99MT2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Msh4Q99MT2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Msh4Q99MT2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Msh4Q99MT2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh4Q99MT2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Gm10493-201ENSMUST00000097270 612 ntBASIC18.44■□□□□ 0.54
Msh4Q99MT2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.44■□□□□ 0.54
Msh4Q99MT2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh4Q99MT2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh4Q99MT2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms