Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf111Q99ML9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rnf111Q99ML9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Gm27454-201ENSMUST00000185090 204 ntBASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rnf111Q99ML9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.42■□□□□ 0.54
Rnf111Q99ML9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf111Q99ML9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf111Q99ML9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.4■□□□□ 0.54
Rnf111Q99ML9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf111Q99ML9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf111Q99ML9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf111Q99ML9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Rnf111Q99ML9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf111Q99ML9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Gm12251-201ENSMUST00000117893 792 ntBASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms