Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.66■□□□□ 0.26
Scrt1Q99M85 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.66■□□□□ 0.26
Scrt1Q99M85 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scrt1Q99M85 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Gm6420-201ENSMUST00000193885 723 ntBASIC16.65■□□□□ 0.26
Scrt1Q99M85 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.65■□□□□ 0.26
Scrt1Q99M85 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Gm10812-201ENSMUST00000099864 546 ntBASIC16.65■□□□□ 0.26
Scrt1Q99M85 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scrt1Q99M85 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scrt1Q99M85 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.64■□□□□ 0.25
Scrt1Q99M85 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Scrt1Q99M85 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.63■□□□□ 0.25
Scrt1Q99M85 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Gm37856-201ENSMUST00000191634 999 ntBASIC16.63■□□□□ 0.25
Scrt1Q99M85 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.63■□□□□ 0.25
Scrt1Q99M85 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scrt1Q99M85 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scrt1Q99M85 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Gm38205-201ENSMUST00000192243 258 ntBASIC16.61■□□□□ 0.25
Scrt1Q99M85 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Scrt1Q99M85 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms