Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Mir6982-201ENSMUST00000184354 68 ntBASIC22.03■■□□□ 1.12
Rfc4Q99J62 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Rfc4Q99J62 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rfc4Q99J62 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rfc4Q99J62 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rfc4Q99J62 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rfc4Q99J62 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rfc4Q99J62 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Rfc4Q99J62 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.01■■□□□ 1.11
Rfc4Q99J62 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Rfc4Q99J62 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Gm22325-201ENSMUST00000158904 308 ntBASIC22.01■■□□□ 1.11
Rfc4Q99J62 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.01■■□□□ 1.11
Rfc4Q99J62 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rfc4Q99J62 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rfc4Q99J62 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rfc4Q99J62 AC158538.1-201ENSMUST00000225870 294 ntBASIC22■■□□□ 1.11
Rfc4Q99J62 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rfc4Q99J62 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rfc4Q99J62 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.99■■□□□ 1.11
Rfc4Q99J62 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfc4Q99J62 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Gm27275-201ENSMUST00000184318 272 ntBASIC21.98■■□□□ 1.11
Rfc4Q99J62 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfc4Q99J62 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Gm12896-201ENSMUST00000118430 226 ntBASIC21.97■■□□□ 1.11
Rfc4Q99J62 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfc4Q99J62 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.96■■□□□ 1.11
Rfc4Q99J62 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Rfc4Q99J62 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfc4Q99J62 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfc4Q99J62 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.95■■□□□ 1.1
Rfc4Q99J62 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rfc4Q99J62 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfc4Q99J62 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rfc4Q99J62 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rfc4Q99J62 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rfc4Q99J62 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfc4Q99J62 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms