Protein–RNA interactions for Protein: Q920N1

Odf3, Outer dense fiber protein 3, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf3Q920N1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Odf3Q920N1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Odf3Q920N1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Odf3Q920N1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Odf3Q920N1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Odf3Q920N1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Odf3Q920N1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Gm11421-201ENSMUST00000122124 294 ntBASIC14.26□□□□□ -0.13
Odf3Q920N1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Smad6-203ENSMUST00000179458 273 ntBASIC14.26□□□□□ -0.13
Odf3Q920N1 Mir7075-201ENSMUST00000184187 82 ntBASIC14.26□□□□□ -0.13
Odf3Q920N1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.26□□□□□ -0.13
Odf3Q920N1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.26□□□□□ -0.13
Odf3Q920N1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Odf3Q920N1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Odf3Q920N1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Odf3Q920N1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Rarb-207ENSMUST00000225921 2756 ntBASIC14.25□□□□□ -0.13
Odf3Q920N1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Odf3Q920N1 Golph3-205ENSMUST00000228671 2842 ntBASIC14.25□□□□□ -0.13
Odf3Q920N1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Odf3Q920N1 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.24□□□□□ -0.13
Odf3Q920N1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Odf3Q920N1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.24□□□□□ -0.13
Odf3Q920N1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Odf3Q920N1 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.24□□□□□ -0.13
Odf3Q920N1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Odf3Q920N1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Odf3Q920N1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Odf3Q920N1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Odf3Q920N1 Gm8493-201ENSMUST00000196881 489 ntBASIC14.23□□□□□ -0.13
Odf3Q920N1 Gm43173-201ENSMUST00000202246 593 ntBASIC14.23□□□□□ -0.13
Odf3Q920N1 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.23□□□□□ -0.13
Odf3Q920N1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Odf3Q920N1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.23□□□□□ -0.13
Odf3Q920N1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.23□□□□□ -0.13
Odf3Q920N1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Odf3Q920N1 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.23□□□□□ -0.13
Odf3Q920N1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Odf3Q920N1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Odf3Q920N1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.22□□□□□ -0.13
Odf3Q920N1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Odf3Q920N1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.22□□□□□ -0.13
Odf3Q920N1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.22□□□□□ -0.13
Odf3Q920N1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Odf3Q920N1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.22□□□□□ -0.13
Odf3Q920N1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf3Q920N1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms