Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdha9Q91Y11 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha9Q91Y11 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha9Q91Y11 Gm13146-201ENSMUST00000118508 780 ntBASIC20.27■□□□□ 0.84
Pcdha9Q91Y11 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha9Q91Y11 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdha9Q91Y11 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha9Q91Y11 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha9Q91Y11 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdha9Q91Y11 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.26■□□□□ 0.83
Pcdha9Q91Y11 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha9Q91Y11 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.26■□□□□ 0.83
Pcdha9Q91Y11 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha9Q91Y11 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha9Q91Y11 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha9Q91Y11 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Gm8495-201ENSMUST00000188740 694 ntBASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Gm42642-201ENSMUST00000200683 355 ntBASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha9Q91Y11 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha9Q91Y11 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha9Q91Y11 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Gm10033-202ENSMUST00000211874 928 ntBASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha9Q91Y11 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha9Q91Y11 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha9Q91Y11 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha9Q91Y11 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha9Q91Y11 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha9Q91Y11 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha9Q91Y11 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha9Q91Y11 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.2■□□□□ 0.82
Pcdha9Q91Y11 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms