Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb4Q91XZ6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb4Q91XZ6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb4Q91XZ6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb4Q91XZ6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb4Q91XZ6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb4Q91XZ6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb4Q91XZ6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb4Q91XZ6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb4Q91XZ6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb4Q91XZ6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb4Q91XZ6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb4Q91XZ6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb4Q91XZ6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Gm12251-201ENSMUST00000117893 792 ntBASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb4Q91XZ6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb4Q91XZ6 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.79■□□□□ 0.6
Pcdhb4Q91XZ6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb4Q91XZ6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb4Q91XZ6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb4Q91XZ6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb4Q91XZ6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms