Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga11Q91XY8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga11Q91XY8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga11Q91XY8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga11Q91XY8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Gm12251-201ENSMUST00000117893 792 ntBASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga11Q91XY8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga11Q91XY8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga11Q91XY8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Pcdhga11Q91XY8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga11Q91XY8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga11Q91XY8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga11Q91XY8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga11Q91XY8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga11Q91XY8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Gm6139-201ENSMUST00000079261 882 ntBASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga11Q91XY8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms