Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb2Q91XX7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb2Q91XX7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Gm22238-201ENSMUST00000175222 88 ntBASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb2Q91XX7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb2Q91XX7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb2Q91XX7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgb2Q91XX7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb2Q91XX7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgb2Q91XX7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb2Q91XX7 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Rarb-207ENSMUST00000225921 2756 ntBASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb2Q91XX7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms