Protein–RNA interactions for Protein: Q91XD6

Vps36, Vacuolar protein-sorting-associated protein 36, mousemouse

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36Q91XD6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 Iqck-206ENSMUST00000208658 2891 ntBASIC20.52■□□□□ 0.88
Vps36Q91XD6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.52■□□□□ 0.88
Vps36Q91XD6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps36Q91XD6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vps36Q91XD6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Vps36Q91XD6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Vps36Q91XD6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Gm26833-201ENSMUST00000180899 440 ntBASIC20.51■□□□□ 0.87
Vps36Q91XD6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Vps36Q91XD6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
Vps36Q91XD6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps36Q91XD6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps36Q91XD6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.48■□□□□ 0.87
Vps36Q91XD6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Vps36Q91XD6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps36Q91XD6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vps36Q91XD6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps36Q91XD6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.47■□□□□ 0.87
Vps36Q91XD6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vps36Q91XD6 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.47■□□□□ 0.87
Vps36Q91XD6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Vps36Q91XD6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps36Q91XD6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps36Q91XD6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Vps36Q91XD6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms