Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb17Q91VD8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb17Q91VD8 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.7■□□□□ 0.74
Pcdhb17Q91VD8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb17Q91VD8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdhb17Q91VD8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb17Q91VD8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb17Q91VD8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Gm26571-201ENSMUST00000181399 666 ntBASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Gm18671-201ENSMUST00000214826 683 ntBASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb17Q91VD8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb17Q91VD8 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb17Q91VD8 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Gm13534-201ENSMUST00000121169 513 ntBASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 AV356131-201ENSMUST00000206201 750 ntBASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb17Q91VD8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb17Q91VD8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdhb17Q91VD8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb17Q91VD8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
Pcdhb17Q91VD8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Gm28196-201ENSMUST00000187719 640 ntBASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb17Q91VD8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms