Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh18Q8VHR0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh18Q8VHR0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh18Q8VHR0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh18Q8VHR0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh18Q8VHR0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh18Q8VHR0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Rps24-207ENSMUST00000224568 714 ntBASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh18Q8VHR0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdh18Q8VHR0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh18Q8VHR0 Gm45102-201ENSMUST00000207427 857 ntBASIC18.25■□□□□ 0.51
Pcdh18Q8VHR0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdh18Q8VHR0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh18Q8VHR0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.25■□□□□ 0.51
Pcdh18Q8VHR0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Gm14117-201ENSMUST00000122417 843 ntBASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh18Q8VHR0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh18Q8VHR0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh18Q8VHR0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms