Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Gm2399-201ENSMUST00000104944 225 ntBASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lmcd1Q8VEE1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lmcd1Q8VEE1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.39■□□□□ 0.86
Lmcd1Q8VEE1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lmcd1Q8VEE1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lmcd1Q8VEE1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lmcd1Q8VEE1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lmcd1Q8VEE1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.39■□□□□ 0.85
Lmcd1Q8VEE1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lmcd1Q8VEE1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lmcd1Q8VEE1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Gm5417-201ENSMUST00000079706 384 ntBASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lmcd1Q8VEE1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lmcd1Q8VEE1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 Gm7367-201ENSMUST00000057611 492 ntBASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lmcd1Q8VEE1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Gm27741-201ENSMUST00000185060 237 ntBASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lmcd1Q8VEE1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.33■□□□□ 0.85
Lmcd1Q8VEE1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lmcd1Q8VEE1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Lmcd1Q8VEE1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lmcd1Q8VEE1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Lmcd1Q8VEE1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lmcd1Q8VEE1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lmcd1Q8VEE1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lmcd1Q8VEE1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.32■□□□□ 0.84
Lmcd1Q8VEE1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms