Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Gm7290-201ENSMUST00000104990 617 ntBASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Gm12918-201ENSMUST00000120234 636 ntBASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Gm15710-201ENSMUST00000121821 636 ntBASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Gm5075-201ENSMUST00000196916 622 ntBASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Gm4968-201ENSMUST00000071458 858 ntBASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx39aQ8VDW0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx39aQ8VDW0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Gm6211-202ENSMUST00000167849 925 ntBASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx39aQ8VDW0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.14■□□□□ 0.98
Ddx39aQ8VDW0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.14■□□□□ 0.98
Ddx39aQ8VDW0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx39aQ8VDW0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx39aQ8VDW0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.12■□□□□ 0.97
Ddx39aQ8VDW0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Gm10653-202ENSMUST00000139570 835 ntBASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx39aQ8VDW0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms