Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Mir7075-201ENSMUST00000184187 82 ntBASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps39Q8R5L3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps39Q8R5L3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps39Q8R5L3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps39Q8R5L3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
Vps39Q8R5L3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Gm12821-201ENSMUST00000120022 600 ntBASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps39Q8R5L3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps39Q8R5L3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps39Q8R5L3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps39Q8R5L3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Vps39Q8R5L3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19■□□□□ 0.63
Vps39Q8R5L3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vps39Q8R5L3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19■□□□□ 0.63
Vps39Q8R5L3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps39Q8R5L3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vps39Q8R5L3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vps39Q8R5L3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps39Q8R5L3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms