Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cystm1Q8K353 BC021767-201ENSMUST00000126387 1716 ntBASIC11.91□□□□□ -0.5
Cystm1Q8K353 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Gm13241-201ENSMUST00000094493 780 ntBASIC11.91□□□□□ -0.5
Cystm1Q8K353 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cystm1Q8K353 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC11.9□□□□□ -0.5
Cystm1Q8K353 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC11.9□□□□□ -0.5
Cystm1Q8K353 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cystm1Q8K353 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cystm1Q8K353 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Gm22238-201ENSMUST00000175222 88 ntBASIC11.89□□□□□ -0.51
Cystm1Q8K353 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cystm1Q8K353 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Gm12922-201ENSMUST00000120626 809 ntBASIC11.88□□□□□ -0.51
Cystm1Q8K353 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cystm1Q8K353 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cystm1Q8K353 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms