Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Trim68Q8K243 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim68Q8K243 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim68Q8K243 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trim68Q8K243 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim68Q8K243 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trim68Q8K243 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim68Q8K243 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim68Q8K243 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim68Q8K243 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim68Q8K243 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim68Q8K243 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim68Q8K243 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Trim68Q8K243 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.54■□□□□ 0.88
Trim68Q8K243 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trim68Q8K243 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim68Q8K243 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Gm20049-201ENSMUST00000219950 730 ntBASIC20.53■□□□□ 0.88
Trim68Q8K243 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.53■□□□□ 0.88
Trim68Q8K243 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim68Q8K243 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim68Q8K243 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim68Q8K243 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim68Q8K243 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.52■□□□□ 0.88
Trim68Q8K243 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim68Q8K243 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim68Q8K243 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim68Q8K243 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim68Q8K243 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim68Q8K243 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim68Q8K243 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.51■□□□□ 0.87
Trim68Q8K243 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim68Q8K243 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Trim68Q8K243 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim68Q8K243 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim68Q8K243 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Trim68Q8K243 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim68Q8K243 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim68Q8K243 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim68Q8K243 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim68Q8K243 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim68Q8K243 Gm6420-201ENSMUST00000193885 723 ntBASIC20.5■□□□□ 0.87
Trim68Q8K243 Gm10812-201ENSMUST00000099864 546 ntBASIC20.5■□□□□ 0.87
Trim68Q8K243 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim68Q8K243 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim68Q8K243 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim68Q8K243 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms