Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopaQ8CIE6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.36■□□□□ 0.69
CopaQ8CIE6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CopaQ8CIE6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopaQ8CIE6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Gm18671-201ENSMUST00000214826 683 ntBASIC19.35■□□□□ 0.69
CopaQ8CIE6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CopaQ8CIE6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.34■□□□□ 0.69
CopaQ8CIE6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopaQ8CIE6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
CopaQ8CIE6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopaQ8CIE6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopaQ8CIE6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CopaQ8CIE6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CopaQ8CIE6 Gm37179-201ENSMUST00000194862 823 ntBASIC19.33■□□□□ 0.68
CopaQ8CIE6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CopaQ8CIE6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.33■□□□□ 0.68
CopaQ8CIE6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.33■□□□□ 0.68
CopaQ8CIE6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CopaQ8CIE6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CopaQ8CIE6 Golph3-205ENSMUST00000228671 2842 ntBASIC19.33■□□□□ 0.68
CopaQ8CIE6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CopaQ8CIE6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.33■□□□□ 0.68
CopaQ8CIE6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopaQ8CIE6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.32■□□□□ 0.68
CopaQ8CIE6 AV356131-201ENSMUST00000206201 750 ntBASIC19.32■□□□□ 0.68
CopaQ8CIE6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopaQ8CIE6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.32■□□□□ 0.68
CopaQ8CIE6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CopaQ8CIE6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CopaQ8CIE6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Gm42778-201ENSMUST00000199644 553 ntBASIC19.31■□□□□ 0.68
CopaQ8CIE6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CopaQ8CIE6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CopaQ8CIE6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
CopaQ8CIE6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CopaQ8CIE6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.29■□□□□ 0.68
CopaQ8CIE6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CopaQ8CIE6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.28■□□□□ 0.68
CopaQ8CIE6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.28■□□□□ 0.68
CopaQ8CIE6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms