Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rftn2Q8CHX7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rftn2Q8CHX7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rftn2Q8CHX7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rftn2Q8CHX7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rftn2Q8CHX7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rftn2Q8CHX7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rftn2Q8CHX7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rftn2Q8CHX7 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.3■□□□□ 0.84
Rftn2Q8CHX7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rftn2Q8CHX7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rftn2Q8CHX7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rftn2Q8CHX7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.3■□□□□ 0.84
Rftn2Q8CHX7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rftn2Q8CHX7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rftn2Q8CHX7 Gm6211-202ENSMUST00000167849 925 ntBASIC20.28■□□□□ 0.84
Rftn2Q8CHX7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rftn2Q8CHX7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.28■□□□□ 0.84
Rftn2Q8CHX7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rftn2Q8CHX7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rftn2Q8CHX7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Gm13148-201ENSMUST00000118892 745 ntBASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.27■□□□□ 0.84
Rftn2Q8CHX7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rftn2Q8CHX7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rftn2Q8CHX7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rftn2Q8CHX7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Rftn2Q8CHX7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rftn2Q8CHX7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Rftn2Q8CHX7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rftn2Q8CHX7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rftn2Q8CHX7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rftn2Q8CHX7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rftn2Q8CHX7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rftn2Q8CHX7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms