Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 BC021767-201ENSMUST00000126387 1716 ntBASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp28Q8CGV8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp28Q8CGV8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp28Q8CGV8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Mmp28Q8CGV8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp28Q8CGV8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp28Q8CGV8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp28Q8CGV8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.21■□□□□ 0.18
Mmp28Q8CGV8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp28Q8CGV8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Gm10399-202ENSMUST00000202768 748 ntBASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.2■□□□□ 0.18
Mmp28Q8CGV8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Mmp28Q8CGV8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp28Q8CGV8 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms