Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Gm12821-201ENSMUST00000120022 600 ntBASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc38Q8CDN8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Gm27454-201ENSMUST00000185090 204 ntBASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Gm8493-201ENSMUST00000196881 489 ntBASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc38Q8CDN8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc38Q8CDN8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc38Q8CDN8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Gm11421-201ENSMUST00000122124 294 ntBASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc38Q8CDN8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc38Q8CDN8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc38Q8CDN8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc38Q8CDN8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc38Q8CDN8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ccdc38Q8CDN8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc38Q8CDN8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc38Q8CDN8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc38Q8CDN8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc38Q8CDN8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Gm6139-201ENSMUST00000079261 882 ntBASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc38Q8CDN8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms