Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
4933409G03RikQ8C5U0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Gm10653-202ENSMUST00000139570 835 ntBASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
4933409G03RikQ8C5U0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
4933409G03RikQ8C5U0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
4933409G03RikQ8C5U0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933409G03RikQ8C5U0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933409G03RikQ8C5U0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
4933409G03RikQ8C5U0 Gm12527-201ENSMUST00000117967 564 ntBASIC20.66■□□□□ 0.9
4933409G03RikQ8C5U0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
4933409G03RikQ8C5U0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
4933409G03RikQ8C5U0 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.66■□□□□ 0.9
4933409G03RikQ8C5U0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
4933409G03RikQ8C5U0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 Gm8520-201ENSMUST00000186517 868 ntBASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933409G03RikQ8C5U0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
4933409G03RikQ8C5U0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
4933409G03RikQ8C5U0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
4933409G03RikQ8C5U0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
4933409G03RikQ8C5U0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
4933409G03RikQ8C5U0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
4933409G03RikQ8C5U0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
4933409G03RikQ8C5U0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
4933409G03RikQ8C5U0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.64■□□□□ 0.89
4933409G03RikQ8C5U0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
4933409G03RikQ8C5U0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.64■□□□□ 0.89
4933409G03RikQ8C5U0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
4933409G03RikQ8C5U0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
4933409G03RikQ8C5U0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Rab3c-203ENSMUST00000224180 967 ntBASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
4933409G03RikQ8C5U0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 466.8 ms