Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 BC021767-201ENSMUST00000126387 1716 ntBASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tsen54Q8C2A2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Tsen54Q8C2A2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tsen54Q8C2A2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tsen54Q8C2A2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tsen54Q8C2A2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.86■□□□□ 0.13
Tsen54Q8C2A2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tsen54Q8C2A2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Gm22238-201ENSMUST00000175222 88 ntBASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms