Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps9d1Q8C190 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps9d1Q8C190 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.77■□□□□ 0.43
Vps9d1Q8C190 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps9d1Q8C190 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps9d1Q8C190 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps9d1Q8C190 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Vps9d1Q8C190 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps9d1Q8C190 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.75■□□□□ 0.43
Vps9d1Q8C190 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps9d1Q8C190 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps9d1Q8C190 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps9d1Q8C190 Gm12821-201ENSMUST00000120022 600 ntBASIC17.74■□□□□ 0.43
Vps9d1Q8C190 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.74■□□□□ 0.43
Vps9d1Q8C190 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps9d1Q8C190 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.73■□□□□ 0.43
Vps9d1Q8C190 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.73■□□□□ 0.43
Vps9d1Q8C190 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps9d1Q8C190 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Gm27454-201ENSMUST00000185090 204 ntBASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.72■□□□□ 0.43
Vps9d1Q8C190 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps9d1Q8C190 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vps9d1Q8C190 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps9d1Q8C190 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Vps9d1Q8C190 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps9d1Q8C190 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps9d1Q8C190 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps9d1Q8C190 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms