Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.77■□□□□ 0.43
Cpne1Q8C166 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpne1Q8C166 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpne1Q8C166 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.77■□□□□ 0.43
Cpne1Q8C166 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpne1Q8C166 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cpne1Q8C166 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne1Q8C166 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne1Q8C166 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.76■□□□□ 0.43
Cpne1Q8C166 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne1Q8C166 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne1Q8C166 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.76■□□□□ 0.43
Cpne1Q8C166 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.76■□□□□ 0.43
Cpne1Q8C166 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne1Q8C166 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne1Q8C166 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne1Q8C166 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.75■□□□□ 0.43
Cpne1Q8C166 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne1Q8C166 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.75■□□□□ 0.43
Cpne1Q8C166 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.75■□□□□ 0.43
Cpne1Q8C166 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne1Q8C166 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cpne1Q8C166 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.74■□□□□ 0.43
Cpne1Q8C166 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cpne1Q8C166 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.74■□□□□ 0.43
Cpne1Q8C166 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cpne1Q8C166 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.73■□□□□ 0.43
Cpne1Q8C166 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.73■□□□□ 0.43
Cpne1Q8C166 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne1Q8C166 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.72■□□□□ 0.43
Cpne1Q8C166 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.72■□□□□ 0.43
Cpne1Q8C166 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.72■□□□□ 0.43
Cpne1Q8C166 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.72■□□□□ 0.43
Cpne1Q8C166 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne1Q8C166 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne1Q8C166 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne1Q8C166 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Cpne1Q8C166 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne1Q8C166 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne1Q8C166 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne1Q8C166 Gm9988-201ENSMUST00000069786 435 ntBASIC17.71■□□□□ 0.43
Cpne1Q8C166 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne1Q8C166 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms