Protein–RNA interactions for Protein: Q8BXL9

Iffo1, Intermediate filament family orphan 1, mousemouse

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Iffo1Q8BXL9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Iffo1Q8BXL9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Iffo1Q8BXL9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Iffo1Q8BXL9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Iffo1Q8BXL9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Iffo1Q8BXL9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Iffo1Q8BXL9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Iffo1Q8BXL9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Iffo1Q8BXL9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.59■□□□□ 0.73
Iffo1Q8BXL9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Iffo1Q8BXL9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Iffo1Q8BXL9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Iffo1Q8BXL9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Iffo1Q8BXL9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Iffo1Q8BXL9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Iffo1Q8BXL9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Iffo1Q8BXL9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Iffo1Q8BXL9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Iffo1Q8BXL9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Iffo1Q8BXL9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.57■□□□□ 0.72
Iffo1Q8BXL9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Iffo1Q8BXL9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.55■□□□□ 0.72
Iffo1Q8BXL9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Iffo1Q8BXL9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms