Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp43Q8BUM9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp43Q8BUM9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp43Q8BUM9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp43Q8BUM9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp43Q8BUM9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp43Q8BUM9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Gm38205-201ENSMUST00000192243 258 ntBASIC19.25■□□□□ 0.67
Usp43Q8BUM9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp43Q8BUM9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms