Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 AA386476-201ENSMUST00000098781 1665 ntBASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf4Q8BQZ5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf4Q8BQZ5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf4Q8BQZ5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf4Q8BQZ5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf4Q8BQZ5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cpsf4Q8BQZ5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Cpsf4Q8BQZ5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf4Q8BQZ5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Gm43060-201ENSMUST00000200621 289 ntBASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cpsf4Q8BQZ5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf4Q8BQZ5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf4Q8BQZ5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms