Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip4Q8BQP8 AV356131-201ENSMUST00000206201 750 ntBASIC21.03■□□□□ 0.96
Rab11fip4Q8BQP8 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.03■□□□□ 0.96
Rab11fip4Q8BQP8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip4Q8BQP8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip4Q8BQP8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip4Q8BQP8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip4Q8BQP8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip4Q8BQP8 Gm10033-202ENSMUST00000211874 928 ntBASIC21.02■□□□□ 0.96
Rab11fip4Q8BQP8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip4Q8BQP8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip4Q8BQP8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.02■□□□□ 0.95
Rab11fip4Q8BQP8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab11fip4Q8BQP8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Rab11fip4Q8BQP8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab11fip4Q8BQP8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab11fip4Q8BQP8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab11fip4Q8BQP8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Gm9988-201ENSMUST00000069786 435 ntBASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rab11fip4Q8BQP8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Gm37179-201ENSMUST00000194862 823 ntBASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Rab11fip4Q8BQP8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip4Q8BQP8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rab11fip4Q8BQP8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rab11fip4Q8BQP8 Golph3-205ENSMUST00000228671 2842 ntBASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rab11fip4Q8BQP8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip4Q8BQP8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms