Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sfr1Q8BP27 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Gm42642-201ENSMUST00000200683 355 ntBASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sfr1Q8BP27 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sfr1Q8BP27 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
Sfr1Q8BP27 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sfr1Q8BP27 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sfr1Q8BP27 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Reep4-203ENSMUST00000226563 1444 ntBASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sfr1Q8BP27 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Gm13234-201ENSMUST00000120010 747 ntBASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sfr1Q8BP27 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Gm18671-201ENSMUST00000214826 683 ntBASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sfr1Q8BP27 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sfr1Q8BP27 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms