Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf18Q8BM39 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf18Q8BM39 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf18Q8BM39 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.03■□□□□ 0.48
Prpf18Q8BM39 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf18Q8BM39 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Prpf18Q8BM39 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf18Q8BM39 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf18Q8BM39 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Gm22238-201ENSMUST00000175222 88 ntBASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Rarb-207ENSMUST00000225921 2756 ntBASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf18Q8BM39 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Prpf18Q8BM39 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18■□□□□ 0.47
Prpf18Q8BM39 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Prpf18Q8BM39 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 BC021767-201ENSMUST00000126387 1716 ntBASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms