Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm21596-201ENSMUST00000178049 1316 ntBASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Col16a1Q8BLX7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col16a1Q8BLX7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col16a1Q8BLX7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col16a1Q8BLX7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col16a1Q8BLX7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col16a1Q8BLX7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Col16a1Q8BLX7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC25.35■■□□□ 1.65
Col16a1Q8BLX7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Col16a1Q8BLX7 Gm37055-201ENSMUST00000191866 133 ntBASIC25.35■■□□□ 1.65
Col16a1Q8BLX7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC25.35■■□□□ 1.65
Col16a1Q8BLX7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC25.35■■□□□ 1.65
Col16a1Q8BLX7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 AC154649.1-201ENSMUST00000227392 384 ntBASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col16a1Q8BLX7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col16a1Q8BLX7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Col16a1Q8BLX7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Col16a1Q8BLX7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Col16a1Q8BLX7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Col16a1Q8BLX7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.32■■□□□ 1.64
Col16a1Q8BLX7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Col16a1Q8BLX7 Gm44549-201ENSMUST00000208351 577 ntBASIC25.32■■□□□ 1.64
Col16a1Q8BLX7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col16a1Q8BLX7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col16a1Q8BLX7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col16a1Q8BLX7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
Col16a1Q8BLX7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC25.31■■□□□ 1.64
Col16a1Q8BLX7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col16a1Q8BLX7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Gm43006-201ENSMUST00000197702 1602 ntBASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Gm11643-201ENSMUST00000119578 864 ntBASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Gm18666-201ENSMUST00000190039 958 ntBASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms