Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cdkl3Q8BLF2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl3Q8BLF2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.42■□□□□ 0.22
Cdkl3Q8BLF2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl3Q8BLF2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Gm10420-201ENSMUST00000121713 882 ntBASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.4■□□□□ 0.22
Cdkl3Q8BLF2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.39■□□□□ 0.21
Cdkl3Q8BLF2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms