Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm4Q8BKA3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm4Q8BKA3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm4Q8BKA3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srrm4Q8BKA3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srrm4Q8BKA3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Gm9988-201ENSMUST00000069786 435 ntBASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srrm4Q8BKA3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Gm42642-201ENSMUST00000200683 355 ntBASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srrm4Q8BKA3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms