Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp1Q8BJQ2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Usp1Q8BJQ2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Usp1Q8BJQ2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Gm7860-201ENSMUST00000121190 879 ntBASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.19■□□□□ 0.82
Usp1Q8BJQ2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp1Q8BJQ2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.18■□□□□ 0.82
Usp1Q8BJQ2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.18■□□□□ 0.82
Usp1Q8BJQ2 Gm12527-201ENSMUST00000117967 564 ntBASIC20.18■□□□□ 0.82
Usp1Q8BJQ2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.18■□□□□ 0.82
Usp1Q8BJQ2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp1Q8BJQ2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.18■□□□□ 0.82
Usp1Q8BJQ2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp1Q8BJQ2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp1Q8BJQ2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Gm8520-201ENSMUST00000186517 868 ntBASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms