Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tdp1Q8BJ37 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 Gm12896-201ENSMUST00000118430 226 ntBASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tdp1Q8BJ37 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tdp1Q8BJ37 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tdp1Q8BJ37 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tdp1Q8BJ37 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tdp1Q8BJ37 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Tdp1Q8BJ37 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tdp1Q8BJ37 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tdp1Q8BJ37 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tdp1Q8BJ37 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tdp1Q8BJ37 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Tdp1Q8BJ37 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Tdp1Q8BJ37 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tdp1Q8BJ37 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tdp1Q8BJ37 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tdp1Q8BJ37 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tdp1Q8BJ37 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tdp1Q8BJ37 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp1Q8BJ37 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms