Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc5a7Q8BGY9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc5a7Q8BGY9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Slc5a7Q8BGY9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc5a7Q8BGY9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc5a7Q8BGY9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc5a7Q8BGY9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms