Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.7■■□□□ 1.06
Trnp1Q80ZI1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.7■■□□□ 1.06
Trnp1Q80ZI1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trnp1Q80ZI1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.7■■□□□ 1.06
Trnp1Q80ZI1 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.7■■□□□ 1.06
Trnp1Q80ZI1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Gm9987-201ENSMUST00000069768 567 ntBASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.69■■□□□ 1.06
Trnp1Q80ZI1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Gm13158-201ENSMUST00000122007 736 ntBASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trnp1Q80ZI1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trnp1Q80ZI1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trnp1Q80ZI1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trnp1Q80ZI1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trnp1Q80ZI1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Trnp1Q80ZI1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trnp1Q80ZI1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.64■■□□□ 1.05
Trnp1Q80ZI1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trnp1Q80ZI1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trnp1Q80ZI1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trnp1Q80ZI1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trnp1Q80ZI1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms