Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.11■□□□□ 0.17
Upk3bQ80YF6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk3bQ80YF6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Upk3bQ80YF6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Upk3bQ80YF6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Gm22238-201ENSMUST00000175222 88 ntBASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Upk3bQ80YF6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Upk3bQ80YF6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Upk3bQ80YF6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Upk3bQ80YF6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bQ80YF6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bQ80YF6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Upk3bQ80YF6 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.04■□□□□ 0.16
Upk3bQ80YF6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms